PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRAES3BF057100010CFD_t1
Common NameTRAES_3BF057100010CFD_c1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 149aa    MW: 15947.1 Da    PI: 8.3148
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRAES3BF057100010CFD_t1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.71.4e-092886563
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                             ++ +rk++NR++A+rsR+RK+ +++eLe ++++L a N a +  ++e    +a +++e+
  TRAES3BF057100010CFD_t1 28 RKRKRKESNRLSAQRSRARKLLQVDELEAEAAALRARNCAVAAAAQEAARRCAVVQAEN 86
                             6789***********************************99999999999998777776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.6E-72488IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.6E-82470No hitNo description
PROSITE profilePS502179.5652665IPR004827Basic-leucine zipper domain
PfamPF001705.9E-72779IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.2E-62877No hitNo description
PROSITE patternPS0003603146IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MASPGPVTSS LNGSEATRAP PAALTEERKR KRKESNRLSA QRSRARKLLQ VDELEAEAAA  60
LRARNCAVAA AAQEAARRCA VVQAENELLH ARALELGARL ESLAELIQYI DAAAAMGASS  120
IPLAGVNGTA LPQQPILQTE LYCNYPYYC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732RKRKRK
22733RKRKRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003566754.16e-33PREDICTED: ocs element-binding factor 1-like
TrEMBLW5CV691e-101W5CV69_WHEAT; Uncharacterized protein
STRINGBRADI2G40580.12e-32(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP137572428
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]